BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H08LP1|AL427397
(942 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig940 1789 0.0
>3x_Contig940
Length = 3845
Score = 1789 bits (900), Expect = 0.0
Identities = 935/944 (99%), Gaps = 4/944 (0%)
Strand = Plus / Minus
Query: 1 ctctaactagaaacaaatcggttggcaccaaaaactggttccccgttagattagaatgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2366 ctctaactagaaacaaatcggttggcaccaaaaactggttccccgttagattagaatgga 2307
Query: 61 aaaactttttgagaatcttgcctccactacaacgctttctagctctaaatcggagaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2306 aaaactttttgagaatcttgcctccactacaacgctttctagctctaaatcggagaaact 2247
Query: 121 gtcttttttttttttttcaaaaagaacgaaaaatgaacataatagagaagtccttccagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2246 gtcttttttttttttttcaaaaagaacgaaaaatgaacataatagagaagtccttccagt 2187
Query: 181 tttctacgcctggcaatgtaaatacgaagctaaggagtttgcttggagtaccgaaatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2186 tttctacgcctggcaatgtaaatacgaagctaaggagtttgcttggagtaccgaaatggt 2127
Query: 241 actcccatctgttttaactcccccttatgaggagagaaactttaatggagattcgattag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2126 actcccatctgttttaactcccccttatgaggagagaaactttaatggagattcgattag 2067
Query: 301 cagaaacataagaagctccgacaatttccagttttgagaccctaagtagttagaatatta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2066 cagaaacataagaagctccgacaatttccagttttgagaccctaagtagttagaatatta 2007
Query: 361 tgtgagcgtgtttttctttgatatctatcaagatttcttttttactcctcaccacctctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2006 tgtgagcgtgtttttctttgatatctatcaagatttcttttttactcctcaccacctctc 1947
Query: 421 tatttacattgaaagttttgccgaa-gaatccgaatctgtctccaataaaggaacaaacc 479
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1946 tatttacattgaaagttttgccgaaggaatccgaatctgtctccaataaaggaacaaacc 1887
Query: 480 ccctttcccctcctctttaaaaaaaaaagtttgtwagtkatttaacaaccgagcactatt 539
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||
Sbjct: 1886 ccctttcccctcctctttaaaaaaaaaagtttgtaagtgatttaacaaccgagcactatt 1827
Query: 540 atcaaagatgtaattgagagaatcggaggtacatgtccgttggctcctaatagttgtcaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1826 atcaaagatgtaattgagagaatcggaggtacatgtccgttggctcctaatagttgtcaa 1767
Query: 600 gagttggcgtgttgggaaattatcgctacccacatggggttgttggagacgtatgckaga 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1766 gagttggcgtgttgggaaattatcgctacccacatggggttgttggagacgtatgcgaga 1707
Query: 660 ttatactaagaacgctggaggttacccttttcggagtttttgggagtttaatgtgatttt 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1706 ttatactaagaacgctggaggttacccttttcggagtttttgggagtttaatgtgatttt 1647
Query: 720 gtatcaggtgactgacttctttttcttttttttcggagtggtctgaatacaatgtcttgc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1646 gtatcaggtgactgacttctttttcttttttttcggagtggtctgaatacaatgtcttgc 1587
Query: 780 ctagcaacaaaatgatatcgaaggaaaactgggtgaggggctccgaaatttgtggaagtg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1586 ctagcaacaaaatgatatcgaaggaaaactgggtgaggggctccgaaatttgtggaagtg 1527
Query: 840 cgcccgttccttgaggcttgtccatcattaatgtggtagggt-acttcaatggaatttac 898
||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1526 cgctcgttccttgaggcttgtccatcattaatgtggtagggtaacttcaatggaatttac 1467
Query: 899 ga-ttcggaggtaatcttttgttttggtt-acgttcmcgtgaat 940
|| |||||||||||||||||||||||||| |||||| |||||||
Sbjct: 1466 gatttcggaggtaatcttttgttttggttaacgttcacgtgaat 1423
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 17,379
Number of Sequences: 1807
Number of extensions: 17379
Number of successful extensions: 408
Number of sequences better than 1.0e-20: 1
length of query: 942
length of database: 10,358,551
effective HSP length: 16
effective length of query: 926
effective length of database: 10,329,639
effective search space: 9565245714
effective search space used: 9565245714
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)